Context-specific emergence and growth of the SARS-CoV-2 Delta variant

A computationally tractable birth-death model that combines phylogenetic and epidemiological data

Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa

Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK

Social and racial inequalities in COVID-19 risk of hospitalisation and death across São Paulo state, Brazil

Crowding and the shape of COVID-19 epidemics

Preliminary analysis of SARS-CoV-2 importation & establishment of UK transmission lineages

Estimating the asymptomatic proportion of coronavirus disease 2019 (COVID-19) cases on board the Diamond Princess cruise ship, Yokohama, Japan, 2020

Open access epidemiological data from the COVID-19 outbreak